Menu
Cooley Group CF17

(R1b-P312)
Michael Cooley



Big Y Haplo Table


The following table is simply a bare summary of the results and can be copied and pasted into a spreadsheet. This is helpful for keeping track of larger projects. With the exception of those indicated by an asterisk, the novel SNPs (novel variants) can be tested at YSEQ.net for $18 each and a one-time kit fee of $6 for the first order.


 7 August 2022
KITTREEMRCATESTNOVEL VARIANTS
#916609L151>P312Philander Coley (1798-1866)Y-700FTC84279 FTC84326 FTC84335 FTC84487 FTC84497 FTC84745 FTC84782 FTC84786 FTC84796 FTC84858 FTC84909 FTC84932 FTC85032 FTC85050 FTC85089 FTC85120 FTC85140 FTC85180 FTC85196 FTC85352 FTC85415 FTC85683 Y108503 FT358420 FTC85854 FTC85965 MF668810 FTC86165 FGC44283 FTC83781 FTC83840 FTC84190 MF63294 FTC84268 21807477=TA 25812576=GA 3326262=GC 3428071=CT 3432600=AG 5272190=CT 5810047=CG 6566347=TC

      * SNP cannot undergo Sanger testing




Big Y SNP Tree


A SNP (Single Nucleotide Polymorphism) occurs when there's a genetic change at a single position, for example an A mutated to a C. Each marker listed in the tree below is a SNP, and each one was manifested at the birth of a single man. This doesn't happen every generation but, if we had enough data, they'd all line up one after the other in a timeline. In other words, each of these markers is a direct representative of a specific man born at a specific time and place. For that reason, I like to say that "SNPs are people too." It's not literally true, of course, but conjures an image that is reasonably apropos.

Micro-Lesson: What is a SNP?
Click image to enlarge

Every marker above is a direct genetic representation of the first man born with that marker. However, each marker could represent three or four more men not born with a new, unique marker.

Count the number of markers upstream of any one kit. Then multiply that by four generations. I'll leave it to you detemine how many years makes a generation. This can be done for all kits descended from any one haplogroup. Average the grand total to get an average timeline for the haplogroup. The word "average" is, however, the key. The more participants, the more that number will change.



Quick Tree


This is a simplified, barebones, stripped-down SNP Tree (as above). It's called a Quick Tree merely because it can be created once new results are downloaded. It has the advantage of allowing a tested group member to easily trace their SNP lineage.


Click image to enlarge



Timeline Report for Haplogroup P312

FTC84279
FTC84326
FTC84335
FTC84487
FTC84497
FTC84745
FTC84782
FTC84786
FTC84796
FTC84858
FTC84909
FTC84932
FTC85032
FTC85050
FTC85089
FTC85120
FTC85140
FTC85180
FTC85196
FTC85352
FTC85415
FTC85683
Y108503
FT358420
FTC85854
FTC85965
MF668810
FTC86165
FGC44283
FTC83781
FTC83840
FTC84190
MF63294
FTC84268
21807477=TA
25812576=GA
3326262=GC
3428071=CT
3432600=AG
5272190=CT
5810047=CG
6566347=TC
#916609
42

Total SNPs: 42
Number Kits: 1
Avg SNPS per: 42
TMRCA: 2250 BCE to 1578 BCE
Median: 1914 BCE



Y-111 Genetic Distance to Modal


STRs (Short Tandem Repeats) are the markers found on the results page of every FTDNA project. They're completely different from SNPs. For example, the number in the first column for the following markers, labeled DYS393, is merely the count of the number of times the sequence AGAT is repeated in the tester's cells. More about the markers can be found on the Wikipedia page for List of Y-STR markers.

The top line in this graphic, in gray, is the modal value. It represents the most common value found among each tester. The total number of mismatches any one tester has to the modal is noted in blue parenthesis next to the tester's kit number. This number is referred to as the genetic distance or GD. For example, a tester might be a GD of 1 from the modal's CDYb marker but with a total GD of 5 from the modal as a whole.


Click image to enlarge




Y-111 GD Kit to Kit

Here we compare the genetic distance between each tester rather than to the modal. This gives us a better idea as to how closely the testers are related to one another as opposed each to the modal, or mutual ancestor. The results tend to clump together by haplogroup. However, due to the volatile nature of STRs, the clumping is often inconsistent, as shown by the same graphics in the somewhat larger YP4248 Subclade Project. For this reason, STRs are unreliable for phylogeny. Nevertheless, the study can help direct us toward those kits that could provide the greatest impact on the project for Big Y upgrades.

The color version results from replacing the numeric values with color values. This doesn't tell us much for small groups but can be informative for groups of ten and more.


Click image to enlarge



Color Version


Click image to enlarge